PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G05090.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Transducin/WD40 repeat-like protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G05090.2 11 Arabidopsis thaliana 0 753 100 100 8 (1) _
AT3G05090.3 11 Arabidopsis thaliana 0 753 100 100 0 (0) _
AT1G62020.1 11 Arabidopsis thaliana 1E-16 269 25 41 160 (103) M
Os12g06810.1 7 Oryza sativa 0 759 67 78 2 (2) _
Os12g06810.4 7 Oryza sativa 0 727 66 77 1 (1) _
Os12g06810.2 7 Oryza sativa 0 634 67 79 2 (2) _
GRMZM2G167999_P02 3.21 Zea mays 0 469 70 84 0 (0) _
v1_GRMZM2G167999_P02 4a53 Zea mays 0 469 70 84 0 (0) _
Zm00001eb139400_P003 agpv5 Zea mays 0 761 67 78 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(3) DUF3337(1) Nup160(3) RAWUL(1) WD40(7)
TargetP:	Cytoplasm (Class 4 C0.104; M0.485; S0.023; _0.687)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	753 aa (-cTP 738)
Molecular Weight	82.20 kDA(-cTP )
PI	6.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data