PPDB

The Plant Proteome Database

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AT3G04970.1   DHHC-type zinc finger family protein

Lab Annot.
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G04970.3 11Arabidopsis thaliana03101001000 (0)_
AT3G04970.2 11Arabidopsis thaliana03011001000 (0)S
AT5G50020.3 11Arabidopsis thaliana1E-1922731420 (0)_
Os03g24900.1 7Oryza sativa6E-17639160750 (0)S
Os03g24900.2 7Oryza sativa3E-12326563780 (0)S
Os07g28460.1 7Oryza sativa7E-2220932490 (0)M
Zm00001eb394310_P003 agpv5Zea mays2E-17139360760 (0)S
GRMZM2G108384_P01 3.21Zea mays2E-17139360760 (0)S
Zm00001eb394310_P001 agpv5Zea mays7E-13139351660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DHHC(2)
TargetP: Secreted (Class 2 C0.001; M0.309; S0.969; _0.104)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 5 TMs
TAT position:
Length 397 aa (-cTP 387)
Molecular Weight 44.95 kDA(-cTP )
PI 9.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help