PPDB

The Plant Proteome Database

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AT3G04860.1   hypothetical protein (DUF868)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G28150.1 11Arabidopsis thaliana5E-17729182923 (3)C
AT4G12690.1 11Arabidopsis thaliana1E-6626743610 (0)_
AT4G12690.2 11Arabidopsis thaliana1E-6626743610 (0)_
Os03g59200.1 7Oryza sativa2E-12029460770 (0)C
Os07g38460.1 7Oryza sativa3E-10229252690 (0)C
Os01g68140.1 7Oryza sativa4E-5932237530 (0)C
GRMZM2G025164_P01 3.21Zea mays2E-11829459770 (0)C
v1_GRMZM2G025164_P02 4a53Zea mays2E-11829459770 (0)C
GRMZM2G009901_P01 3.21Zea mays6E-11629657750 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF868(1)
TargetP: Chloroplast (Class 5 C0.666; M0.069; S0.012; _0.466)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 289 aa (-cTP 252)
Molecular Weight 32.14 kDA(-cTP 28.23)
PI 9.10(-cTP 9.21)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16
2193Detail        [A. thaliana] total soluble P3-strepII 26

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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