PPDB

PPDB	The Plant Proteome Database

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AT3G04680.1 CLP-similar protein 3

Lab Annot.

Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G04680.3 11 Arabidopsis thaliana 0 444 100 100 0 (0) C
AT3G04680.2 11 Arabidopsis thaliana 0 444 100 100 6 (1) C
AT5G39930.1 11 Arabidopsis thaliana 3E-159 425 55 74 0 (0) M
Os02g12570.1 7 Oryza sativa 0 423 62 83 0 (0) M
Os01g25240.1 7 Oryza sativa 7E-10 137 29 47 0 (0) _
Os01g08850.1 7 Oryza sativa 7E-08 140 24 50 0 (0) C
Zm00001eb205260_P001 agpv5 Zea mays 0 423 64 84 0 (0) C
GRMZM2G038588_P01 3.21 Zea mays 0 423 64 84 4 (4) C
v1_GRMZM2G038588_P01 4a53 Zea mays 0 423 64 84 5 (5) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_16(1) AAA_18(1) AAA_22(1) AAA_24(1) AAA_29(1) ABC_tran(1) ATP_bind_1(1) CbiA
TargetP:	Chloroplast (Class 2 C0.807; M0.097; S0.082; _0.194)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	444 aa (-cTP 417)
Molecular Weight	48.42 kDA(-cTP 45.80)
PI	6.29(-cTP 5.89)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2316	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data