PPDB

The Plant Proteome Database

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AT3G04620.1   Alba DNA/RNA-binding protein

Lab Annot. Target promoter of the male germline-specific transcription factor DUO1.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G29250.1 11Arabidopsis thaliana6E-511007590190 (134)_
AT2G34160.1 11Arabidopsis thaliana9E-51117668278 (54)_
Os06g40040.1 7Oryza sativa5E-5399779236 (36)_
Os02g10810.1 7Oryza sativa1E-5297799228 (28)_
Os12g30550.1 7Oryza sativa5E-4911766822 (2)_
Zm00001eb122810_P001 agpv5Zea mays2E-5012266760 (0)_
v1_GRMZM2G098335_P01 4a53Zea mays2E-50122667649 (49)_
GRMZM2G098335_P01 3.21Zea mays2E-50122667653 (44)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Alba(1) Rpp20(1)
TargetP: Chloroplast (Class 4 C0.667; M0.051; S0.034; _0.429)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 132)
Molecular Weight 17.67 kDA(-cTP 14.46)
PI 5.79(-cTP 6.21)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


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