PPDB

The Plant Proteome Database

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AT3G04170.1   RmlC-like cupins superfamily protein

Lab Annot.
Mapman: 20.2.99 stress.abiotic.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G04150.1 11Arabidopsis thaliana3E-11622873840 (0)S
AT3G04150.2 11Arabidopsis thaliana4E-11324169800 (0)S
AT3G04190.1 11Arabidopsis thaliana2E-10420473830 (0)S
Os02g29000.1 7Oryza sativa9E-6721451700 (0)S
Os08g09040.1 7Oryza sativa2E-6322353650 (0)S
Os02g29020.1 7Oryza sativa4E-6320054690 (0)S
Zm00001eb171500_P001 agpv5Zea mays9E-6321450670 (0)S
GRMZM2G030772_P01 3.21Zea mays9E-6321450673 (3)S
v1_GRMZM2G030772_P02 4a53Zea mays9E-6321450672 (2)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cupin_1(1) Cupin_2(1)
TargetP: Secreted (Class 1 C0.003; M0.040; S0.979; _0.040)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 227 aa (-cTP 158)
Molecular Weight 24.42 kDA(-cTP )
PI 8.29(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help