PPDB

 The Plant Proteome Database

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AT3G04000.1   NAD(P)-binding Rossmann-fold superfamily protein
Lab Annot. NADPH-dependent aldehyde reductase (AKR)
Mapman: *20.3 stress.carbonyls
Curated Location plastid (Pubmed: 23198870 21169367 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G03980.1 11Arabidopsis thaliana1E-129271648161 (39)C
AT5G18210.1 11Arabidopsis thaliana5E-12026866770 (0)M
AT5G18210.2 11Arabidopsis thaliana2E-10925565770 (0)M
Os07g37420.1 7Oryza sativa3E-9025754714 (4)C
Os07g07450.1 7Oryza sativa1E-8125651672 (2)C
Os10g31780.1 7Oryza sativa2E-8125447660 (0)C
Zm00001eb192490_P001 agpv5Zea mays1E-8825754660 (0)_
Zm00001eb300950_P001 agpv5Zea mays2E-7825651680 (0)C
Zm00001eb046850_P001 agpv5Zea mays7E-7626549660 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: adh_short(1) adh_short_C2(1) DUF1776(1) DUF4126(1) Epimerase(1) KR(1) NAD_bindin
TargetP: Chloroplast (Class 3 C0.570; M0.141; S0.107; _0.034)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 272 aa (-cTP 219)
Molecular Weight 28.43 kDA(-cTP 23.19)
PI 6.84(-cTP 5.80)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help