PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G03750.2   SET domain protein 20

Lab Annot.
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G03750.1 11Arabidopsis thaliana035495950 (0)_
AT2G23740.3 11Arabidopsis thaliana1E-2418636530 (0)_
AT2G23740.6 11Arabidopsis thaliana1E-2418636530 (0)_
Os01g56540.1 7Oryza sativa1E-4322442570 (0)_
Os02g47900.1 7Oryza sativa1E-2718340530 (0)_
Os08g30910.1 7Oryza sativa4E-2319936490 (0)M
Zm00001eb104980_P001 agpv5Zea mays7E-9733950600 (0)_
Zm00001eb104980_P002 agpv5Zea mays7E-9733950600 (0)_
v1_GRMZM2G105869_P02 4a53Zea mays7E-9733950600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SET(1)
TargetP: Cytoplasm (Class 5 C0.176; M0.299; S0.005; _0.496)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 354 aa (-cTP 341)
Molecular Weight 38.77 kDA(-cTP )
PI 5.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help