PPDB

PPDB	The Plant Proteome Database

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AT3G03380.1 DegP protease 7

Lab Annot.

DEG7 protease (location unclear - evidence for plastid, mitochondria and nucleus)
Mapman: 29.5.5.1.1* protein.degradation.serine protease.PA.S1

Curated Location

mitochondria (Pubmed: 25161662 )
nucleus (Pubmed: 25161662 )
plastid (Pubmed: 20089771 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G03380.2 11 Arabidopsis thaliana 0 1097 96 96 0 (0) _
AT3G03370.1 11 Arabidopsis thaliana 7E-17 59 72 79 0 (0) _
Os02g48180.1 6 Oryza sativa 0 1120 69 80 6 (6) _
Zm00001eb252510_P003 agpv5 Zea mays 0 1090 72 82 0 (0) _
Zm00001eb252510_P001 agpv5 Zea mays 0 1090 72 82 0 (0) _
Zm00001eb252510_P002 agpv5 Zea mays 0 1090 69 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PDZ(3) PDZ_1(2) PDZ_2(4) PDZ_6(4) Tricorn_PDZ(2) Trypsin_2(2)
TargetP:	Cytoplasm (Class 2 C0.170; M0.069; S0.113; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1097 aa (-cTP 1035)
Molecular Weight	119.88 kDA(-cTP )
PI	5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2286	Detail								[A. thaliana]		Clp C1 WT
2291	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2302	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data