PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G03220.1   expansin A13

Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55500.1 11Arabidopsis thaliana3E-9026050640 (0)S
AT5G56320.1 11Arabidopsis thaliana8E-8923354681 (1)S
AT5G56320.2 11Arabidopsis thaliana8E-8923354680 (0)S
Os04g49410.1 7Oryza sativa7E-11923066834 (4)S
Os03g60720.1 7Oryza sativa1E-8723054684 (4)S
Os06g41700.1 7Oryza sativa1E-8622954700 (0)S
Zm00001eb072890_P001 agpv5Zea mays5E-12223466820 (0)S
v1_GRMZM2G120724_P01 4a53Zea mays5E-12223466821 (1)S
GRMZM2G120724_P01 3.21Zea mays5E-12223466821 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(1) Expansin_C(1)
TargetP: Chloroplast (Class 4 C0.608; M0.344; S0.151; _0.013)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 266 aa (-cTP 222)
Molecular Weight 28.98 kDA(-cTP 24.23)
PI 8.35(-cTP 8.15)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help