PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G03200.1   NAC domain containing protein 45

Lab Annot.
Mapman: 27.3.27 RNA.regulation of transcription.NAC domain transcription factor family; 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17260.1 11Arabidopsis thaliana050364740 (0)_
AT1G65910.1 11Arabidopsis thaliana6E-10750541540 (0)_
AT3G17730.1 11Arabidopsis thaliana1E-8715878870 (0)_
Os03g02800.1 7Oryza sativa1E-9829156640 (0)_
Os09g38010.1 7Oryza sativa7E-8916074890 (0)_
Os09g38010.2 7Oryza sativa4E-8716273880 (0)_
Zm00001eb001460_P002 agpv5Zea mays6E-9929257660 (0)_
Zm00001eb001460_P003 agpv5Zea mays6E-9929257660 (0)_
v1_GRMZM2G406204_P01 4a53Zea mays5E-9829257660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NAM(1)
TargetP: Cytoplasm (Class 2 C0.052; M0.191; S0.107; _0.905)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 479 aa (-cTP 397)
Molecular Weight 55.59 kDA(-cTP )
PI 5.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help