PPDB

PPDB	The Plant Proteome Database

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AT3G03110.1 exportin 1B

Lab Annot.

XPO1B (exportin 1B); protein transporter
Mapman: 29.3.1 protein.targeting.nucleus

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G17020.1 11 Arabidopsis thaliana 0 1076 85 92 162 (116) _
AT5G17020.2 11 Arabidopsis thaliana 0 1076 84 91 148 (103) _
Os03g64080.1 7 Oryza sativa 0 1071 78 86 84 (84) _
Zm00001eb210450_P002 agpv5 Zea mays 0 1074 79 88 0 (0) _
GRMZM2G022258_P02 3.21 Zea mays 0 1074 79 88 52 (49) _
v1_GRMZM2G022258_P02 4a53 Zea mays 0 1074 79 88 45 (45) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CRM1_C(2) CRM1_repeat(1) CRM1_repeat_2(1) CRM1_repeat_3(1) IBN_N(1) RhoGEF(4) Xp
TargetP:	Cytoplasm (Class 2 C0.035; M0.111; S0.221; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	1076 aa (-cTP 1018)
Molecular Weight	123.19 kDA(-cTP )
PI	5.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1613	Detail								Natural Senescence leaf [A. thaliana]
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2286	Detail								[A. thaliana]		Clp C1 WT
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data