PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G03070.1   NADH-ubiquinone oxidoreductase-like protein

Lab Annot. NADH-ubiquinone oxidoreductase-related
Mapman: 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os08g06430.1 7Oryza sativa1E-4111158740 (0)M
Zm00001eb172200_P001 agpv5Zea mays2E-4210862730 (0)M
GRMZM2G059556_P01 3.21Zea mays2E-4210862739 (9)M
v1_GRMZM2G059556_P01 4a53Zea mays6E-40107627311 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-CHCC(1) zf_C2H2_6(1)
TargetP: Mitochondria (Class 4 C0.271; M0.641; S0.045; _0.024)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 110 aa (-cTP 99)
Molecular Weight 12.23 kDA(-cTP )
PI 6.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
18931141(peroxisomes- high&low purity (cell culture))
20197505(mitochondria Complex I (leaf))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help