PPDB

PPDB	The Plant Proteome Database

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AT3G02900.1 Low-density receptor-like protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02900.2 11 Arabidopsis thaliana 8E-103 146 99 99 12 (6) S
AT5G16660.1 11 Arabidopsis thaliana 8E-66 171 64 75 245 (208) C
AT5G16660.2 11 Arabidopsis thaliana 6E-56 171 62 73 233 (196) C
Os12g39370.3 7 Oryza sativa 4E-19 78 53 66 2 (2) M
Os12g39370.2 7 Oryza sativa 8E-19 78 53 66 2 (2) M
Os12g39370.1 7 Oryza sativa 8E-19 78 53 66 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:
TargetP:	Chloroplast (Class 2 C0.928; M0.051; S0.011; _0.149)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	162 aa (-cTP 77)
Molecular Weight	17.32 kDA(-cTP 8.46)
PI	9.52(-cTP 4.95)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1125	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1127	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1261	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 1) thylakoid membrane	shoot1 (null mutant)
1263	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 2) thylakoid membrane	shoot1 (null mutant)
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1984	Detail								leaf [A. thaliana]	plastid	wild-type
2132	Detail								leaf [A. thaliana]	chloroplast fractionation	MSH1
2211	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 Trapst 12
2267	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19995728(proplastid (Brassica napus))
20061580(chloroplast envelope (inner+outer))
21173025(root proteome)

Comparative Proteomics Data