PPDB

The Plant Proteome Database

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AT3G02875.1   Peptidase M20/M25/M40 family protein

Lab Annot. Peptidase M20 (ILR1) (involved in auxin)
Mapman: 29.5.7.7.2* protein.degradation.metalloprotease.MH.M20
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02875.2 11Arabidopsis thaliana0311991000 (0)S
AT3G02875.3 11Arabidopsis thaliana02681001000 (0)S
AT5G56660.1 11Arabidopsis thaliana3E-13539150682 (2)S
Os07g14590.1 7Oryza sativa1E-15639855730 (0)S
Os03g62070.1 7Oryza sativa1E-15640655710 (0)M
Os03g62060.1 7Oryza sativa4E-15641154710 (0)M
GRMZM2G016958_P01 3.21Zea mays3E-16540756742 (2)C
Zm00001eb304530_P004 agpv5Zea mays3E-16540756740 (0)C
v1_GRMZM2G016958_P01 4a53Zea mays3E-16540756741 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: M20_dimer(1) Peptidase_M20(1)
TargetP: Secreted (Class 1 C0.026; M0.007; S0.986; _0.068)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 442 aa (-cTP 422)
Molecular Weight 48.01 kDA(-cTP )
PI 5.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help