PPDB

PPDB	The Plant Proteome Database

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AT3G02820.1 zinc knuckle (CCHC-type) family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02820.2 11 Arabidopsis thaliana 0 282 100 100 0 (0) _
Os02g52460.1 7 Oryza sativa 6E-63 307 40 53 0 (0) C
Zm00001eb228900_P002 agpv5 Zea mays 3E-68 305 41 56 0 (0) C
v1_GRMZM2G057571_P01 4a53 Zea mays 3E-68 305 41 56 1 (1) C
GRMZM2G057571_P01 3.21 Zea mays 3E-68 305 41 56 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RasGAP(1) Remorin_C(1) Swi3(1) zf-CCHC(1) zf-CCHC_2(1) zf-CCHC_3(1) zf-CCHC_5(1)
TargetP:	Chloroplast (Class 1 C0.933; M0.086; S0.005; _0.088)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	282 aa (-cTP 233)
Molecular Weight	31.84 kDA(-cTP 26.72)
PI	6.14(-cTP 5.85)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data