PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G02690.1   nodulin MtN21 /EamA-like transporter family protein

Lab Annot. integral membrane family (Duf6)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g35140.1 7Oryza sativa5E-7413680910 (0)_
Zm00001eb044830_P002 agpv5Zea mays1E-15034567790 (0)C
GRMZM2G095492_P01 3.21Zea mays2E-15034567793 (3)C
v1_GRMZM2G095492_P01 4a53Zea mays2E-15034567790 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BBS2_N(1) EamA(2)
TargetP: Chloroplast (Class 1 C0.981; M0.009; S0.010; _0.019)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 10 TMs
Aramemnon: 10 TMs
TAT position:
Length 417 aa (-cTP 349)
Molecular Weight 44.60 kDA(-cTP 37.06)
PI 5.09(-cTP 4.36)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help