PPDB

PPDB	The Plant Proteome Database

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AT3G02650.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G62680.1 11 Arabidopsis thaliana 7E-37 374 27 45 0 (0) C
AT1G62680.2 11 Arabidopsis thaliana 7E-37 374 27 45 0 (0) C
AT1G12700.3 11 Arabidopsis thaliana 6E-35 327 25 50 0 (0) _
Os01g67210.1 7 Oryza sativa 2E-125 425 45 67 9 (9) M
Os04g40130.1 7 Oryza sativa 2E-36 341 29 48 0 (0) S
Os07g01130.1 7 Oryza sativa 2E-34 333 27 48 0 (0) C
Zm00001eb144640_P001 agpv5 Zea mays 3E-123 562 38 58 0 (0) M
v1_GRMZM2G118362_P01 4a53 Zea mays 3E-123 562 38 58 11 (11) M
GRMZM2G118362_P01 3.21 Zea mays 3E-123 562 38 58 11 (11) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(2) Clathrin(2) GGDEF_2(1) MRP-S27(2) Mtf2(3) PPR(9) PPR_1(9) PPR_2(8) PPR
TargetP:	Chloroplast (Class 5 C0.788; M0.722; S0.001; _0.005)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	576 aa (-cTP 500)
Molecular Weight	63.84 kDA(-cTP 55.39)
PI	5.08(-cTP 4.86)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))
21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data