PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G02640.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G16250.1 11Arabidopsis thaliana9E-9518578880 (0)_
AT5G36800.1 11Arabidopsis thaliana7E-6218454710 (0)S
AT5G36710.1 11Arabidopsis thaliana7E-6218454710 (0)S
Os04g41900.1 7Oryza sativa2E-5518550671 (1)C
Os01g67110.1 7Oryza sativa6E-4013754680 (0)S
Os05g43140.1 7Oryza sativa2E-2712351660 (0)S
v1_GRMZM2G178005_P01 4a53Zea mays2E-5318749650 (0)C
Zm00001eb078560_P001 agpv5Zea mays2E-5318749650 (0)C
GRMZM2G178005_P01 3.21Zea mays2E-5318749650 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1218(2) Tetraspanin(1)
TargetP: Cytoplasm (Class 3 C0.032; M0.237; S0.067; _0.793)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 185 aa (-cTP 123)
Molecular Weight 20.38 kDA(-cTP )
PI 8.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help