PPDB

 The Plant Proteome Database

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AT3G02620.1   Plant stearoyl-acyl-carrier-protein desaturase family protein
Lab Annot.
Mapman: 11.1.15 lipid metabolism.FA synthesis and FA elongation.ACP desaturase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02620.2 11Arabidopsis thaliana04031001000 (0)C
AT3G02610.1 11Arabidopsis thaliana041191943 (3)C
AT3G02610.2 11Arabidopsis thaliana041191940 (0)C
Os04g31070.1 7Oryza sativa035470827 (7)C
Os01g69080.1 7Oryza sativa0354698246 (46)M
Os01g65830.1 7Oryza sativa8E-17334167790 (0)M
Zm00001eb085820_P001 agpv5Zea mays035269820 (0)C
GRMZM2G026793_P01 3.21Zea mays035269821 (1)C
v1_GRMZM2G026793_P01 4a53Zea mays035269821 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: FA_desaturase_2(1) Rubrerythrin(2)
TargetP: Chloroplast (Class 3 C0.626; M0.146; S0.034; _0.057)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 403 aa (-cTP 328)
Molecular Weight 46.16 kDA(-cTP 37.91)
PI 5.86(-cTP 5.27)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help