PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G02610.1   plant stearoyl-acyl-carrier desaturase family protein

Lab Annot. acyl-[acyl-carrier-protein] desaturase
Mapman: 11.1.15 lipid metabolism.FA synthesis and FA elongation.ACP desaturase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02610.2 11Arabidopsis thaliana04111001000 (0)C
AT3G02620.2 11Arabidopsis thaliana041191940 (0)C
AT3G02620.1 11Arabidopsis thaliana041191940 (0)C
Os01g69080.1 7Oryza sativa0373698146 (46)M
Os04g31070.1 7Oryza sativa035871837 (7)C
Os01g65830.1 7Oryza sativa6E-17634168800 (0)M
Zm00001eb085820_P001 agpv5Zea mays037468810 (0)C
GRMZM2G026793_P01 3.21Zea mays037468811 (1)C
v1_GRMZM2G026793_P01 4a53Zea mays037468811 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FA_desaturase_2(1) PriA_3primeBD(1) Rubrerythrin(2)
TargetP: Chloroplast (Class 2 C0.850; M0.168; S0.056; _0.015)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 411 aa (-cTP 367) (-lTP 322)
Molecular Weight 46.95 kDA(-cTP 42.25)(-lTP 37.00)
PI 5.87(-cTP 5.46)(-lTP 5.270)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help