PPDB

PPDB	The Plant Proteome Database

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AT3G02290.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02290.6 11 Arabidopsis thaliana 1E-171 231 100 100 0 (0) _
AT3G02290.4 11 Arabidopsis thaliana 1E-171 231 100 100 0 (0) _
AT3G02290.3 11 Arabidopsis thaliana 1E-171 231 100 100 0 (0) _
Os01g70160.1 7 Oryza sativa 7E-59 242 45 58 0 (0) _
Os11g41140.1 7 Oryza sativa 5E-55 237 43 58 0 (0) _
Os03g40170.1 7 Oryza sativa 8E-33 202 39 52 0 (0) _
v1_GRMZM2G468260_P01 4a53 Zea mays 8E-55 239 44 57 0 (0) _
Zm00001eb166460_P001 agpv5 Zea mays 8E-55 239 44 57 0 (0) _
GRMZM2G468260_P01 3.21 Zea mays 8E-55 239 44 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Rad50_zn_hook(2) RINGv(1) zf-ANAPC11(1) zf-C3H2C3(2) zf-C3HC4(1) zf-C
TargetP:	Cytoplasm (Class 5 C0.531; M0.020; S0.010; _0.698)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	231 aa (-cTP 171)
Molecular Weight	26.26 kDA(-cTP )
PI	5.44(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data