PPDB

The Plant Proteome Database

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AT3G02110.1   serine carboxypeptidase-like 25

Lab Annot. SCPL25 (serine carboxypeptidase-like 25)
Mapman: 29.5.5.5.1* protein.degradation.serine protease.SC.S10
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30610.1 11Arabidopsis thaliana0470607610 (8)C
AT2G24000.1 11Arabidopsis thaliana044860750 (0)S
AT2G24010.1 11Arabidopsis thaliana044558730 (0)S
Os02g55130.2 7Oryza sativa045262770 (0)S
Os02g55130.1 7Oryza sativa045262770 (0)S
Os01g06490.1 7Oryza sativa0445577110 (10)S
v1_GRMZM2G178933_P01 4a53Zea mays044361770 (0)S
Zm00001eb257750_P001 agpv5Zea mays044361770 (0)S
v1_GRMZM2G178933_P02 4a53Zea mays046558730 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_S10(1)
TargetP: Secreted (Class 4 C0.072; M0.091; S0.515; _0.130)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 473 aa (-cTP 457)
Molecular Weight 53.40 kDA(-cTP )
PI 8.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


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