PPDB

PPDB	The Plant Proteome Database

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AT3G02040.1 senescence-related gene 3

Lab Annot.

Glycerophosphodiester phosphodiesterase 1 (GDPD1)
Mapman: 11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase

Curated Location

plastid (Pubmed: 23198870 21323773 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41080.1 11 Arabidopsis thaliana 3E-160 375 61 74 0 (0) _
AT5G41080.2 11 Arabidopsis thaliana 2E-158 338 65 78 0 (0) C
AT5G43300.1 11 Arabidopsis thaliana 2E-133 339 55 73 7 (7) _
Os02g31030.2 7 Oryza sativa 7E-151 337 61 76 0 (0) S
Os02g31030.1 7 Oryza sativa 9E-151 337 61 76 0 (0) S
Os08g42390.1 7 Oryza sativa 2E-126 344 55 71 0 (0) C
v1_GRMZM2G018820_P03 4a53 Zea mays 2E-150 375 56 74 0 (0) S
v1_GRMZM2G018820_P01 4a53 Zea mays 2E-150 375 56 74 0 (0) S
Zm00001eb241920_P002 agpv5 Zea mays 2E-150 375 56 74 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GDPD(1)
TargetP:	Chloroplast (Class 4 C0.726; M0.041; S0.026; _0.403)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	361 aa (-cTP 308)
Molecular Weight	40.71 kDA(-cTP 34.88)
PI	5.87(-cTP 5.38)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data