PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G01980.1 NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot.

short-chain dehydrogenase/reductase (SDR) protein
Mapman: 26.22 misc.short chain dehydrogenase/reductase (SDR)

Curated Location

peroxisome (Pubmed: 21472859 21487095 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G01980.4 11 Arabidopsis thaliana 0 266 100 100 17 (6) _
AT3G01980.3 11 Arabidopsis thaliana 0 296 89 89 17 (6) _
AT3G01980.5 11 Arabidopsis thaliana 2E-175 237 99 99 0 (0) _
Os03g63290.1 7 Oryza sativa 3E-94 264 50 69 0 (0) _
Os08g39960.1 7 Oryza sativa 5E-28 256 30 48 0 (0) C
Os04g33240.1 7 Oryza sativa 9E-14 180 30 47 0 (0) _
Zm00001eb210770_P001 agpv5 Zea mays 8E-100 262 52 71 0 (0) _
v1_GRMZM2G013042_P01 4a53 Zea mays 8E-100 262 52 71 0 (0) _
GRMZM2G013042_P01 3.21 Zea mays 8E-100 262 52 71 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	adh_short(1) adh_short_C2(1) HicB_lk_antitox(2) Wax2_C(2)
TargetP:	Cytoplasm (Class 3 C0.096; M0.285; S0.077; _0.749)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	266 aa (-cTP 234)
Molecular Weight	29.20 kDA(-cTP )
PI	7.14(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
21311031(mitochondria)

Comparative Proteomics Data