PPDB

 The Plant Proteome Database

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AT3G01940.1   transmembrane protein%2C putative (DUF 3339)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27027.1 11Arabidopsis thaliana3E-316777880 (0)S
AT5G63500.1 11Arabidopsis thaliana3E-286672840 (0)S
AT3G48660.1 11Arabidopsis thaliana4E-286671860 (0)S
Os01g69890.1 7Oryza sativa6E-286866830 (0)S
Os07g20290.1 7Oryza sativa1E-276569870 (0)S
Os02g30550.1 7Oryza sativa1E-276567860 (0)S
Zm00001eb305550_P001 agpv5Zea mays1E-266965840 (0)S
GRMZM2G335407_P01 3.21Zea mays1E-266965840 (0)S
v1_GRMZM2G335407_P01 4a53Zea mays1E-266965840 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3339(1) RAMP4(2)
TargetP: Secreted (Class 1 C0.007; M0.115; S0.920; _0.097)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 70 aa (-cTP 56)
Molecular Weight 7.50 kDA(-cTP )
PI 8.06(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help