PPDB

The Plant Proteome Database

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AT3G01890.1   SWIB/MDM2 domain superfamily protein

Lab Annot. SWIB/MDM2 domain protein
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G14170.1 11Arabidopsis thaliana0532667314 (10)_
AT3G03590.1 11Arabidopsis thaliana7E-076939508 (7)C
Os04g31320.1 7Oryza sativa039767807 (7)M
Os04g56980.1 7Oryza sativa5E-068127530 (0)M
Zm00001eb110350_P001 agpv5Zea mays039668790 (0)C
GRMZM2G052416_P01 3.21Zea mays0396687915 (3)C
v1_GRMZM2G052416_P01 4a53Zea mays0396687921 (21)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SWIB(2)
TargetP: Chloroplast (Class 5 C0.404; M0.143; S0.010; _0.285)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 458 aa (-cTP 433)
Molecular Weight 51.33 kDA(-cTP 48.71)
PI 9.16(-cTP 9.17)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1538Detail       leaf [A. thaliana] plastid RNCs thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help