PPDB

The Plant Proteome Database

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AT3G01800.1   Ribosome recycling factor

Lab Annot. ribosome recycling factor
Mapman: 29.2.9* protein.synthesis.ribosome recycling
Curated Location mitochondria

TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G63190.1 11Arabidopsis thaliana3E-251723755577 (390)C
Os04g41300.1 7Oryza sativa9E-10621071878 (8)M
Os07g38300.1 7Oryza sativa7E-26179355846 (46)C
Os07g38300.5 7Oryza sativa6E-21132375834 (34)_
GRMZM2G018689_P01 3.21Zea mays3E-10221069864 (4)M
Zm00001eb425520_P001 agpv5Zea mays3E-10221069860 (0)M
v1_GRMZM2G018689_P01 4a53Zea mays3E-10221069862 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DBINO(1) DUF1664(2) MMADHC(1) RRF(1)
TargetP: Mitochondria (Class 1 C0.125; M0.930; S0.020; _0.016)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 267 aa (-cTP 241)
Molecular Weight 29.17 kDA(-cTP )
PI 9.63(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19525416(leaf (wt and clpr4-1 mutant))
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help