PPDB

 The Plant Proteome Database

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AT3G01790.1   Ribosomal protein L13 family protein
Lab Annot.
Mapman: 29.2.1.2.2.13 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G01790.2 11Arabidopsis thaliana4E-1522051001001 (1)C
AT3G01790.3 11Arabidopsis thaliana4E-961331001000 (0)C
AT1G78630.1 11Arabidopsis thaliana3E-171253354517 (415)C
Os08g06474.1 7Oryza sativa1E-9419972820 (0)M
Os05g15370.1 7Oryza sativa6E-7919071830 (0)M
Os01g67200.1 7Oryza sativa3E-247962770 (0)_
Zm00001eb144650_P002 agpv5Zea mays3E-10419673820 (0)M
GRMZM2G044584_P03 3.21Zea mays3E-10419673821 (1)M
GRMZM2G163473_P01 3.21Zea mays5E-10320172820 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_L13(1)
TargetP: Chloroplast (Class 4 C0.538; M0.118; S0.097; _0.215)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 205 aa (-cTP 201)
Molecular Weight 23.38 kDA(-cTP 22.95)
PI 10.35(-cTP 10.35)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1758Detail       leaf [A. thaliana] total leaf tissue DXS_Flag+fosmidomycin

* For details about the exprimental sources click here.

Published Proteomics Data

 21841088(mitochondria (2DE native gel))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help