PPDB

PPDB	The Plant Proteome Database

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AT3G01780.1 ARM repeat superfamily protein

Lab Annot.

ARM repeat
Mapman: 35.2 not assigned.unknown

Curated Location

TAIR curated location: nucleus & phragmoplast & cytoplasm15469496

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G01780.2 11 Arabidopsis thaliana 0 840 100 100 0 (0) _
Os11g07470.1 7 Oryza sativa 0 1173 69 81 41 (41) _
Os02g55010.1 7 Oryza sativa 0 1173 68 81 25 (25) _
Zm00001eb201030_P001 agpv5 Zea mays 0 1174 68 80 0 (0) _
v1_GRMZM2G472770_P01 4a53 Zea mays 0 794 74 85 4 (4) M
Zm00001eb201030_P002 agpv5 Zea mays 0 800 67 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_11(1) Adaptin_N(2) Coatamer_beta_C(1) CPSF100_C(1) DDHD(1) DUF2052(1) DUF482
TargetP:	Cytoplasm (Class 4 C0.093; M0.140; S0.108; _0.460)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1176 aa (-cTP 1127)
Molecular Weight	130.91 kDA(-cTP )
PI	5.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
394	Detail								leaf [A. thaliana]		ffc1-2
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1494	Detail								leaf [A. thaliana]
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1557	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2270	Detail								seedlings [A. thaliana]	total tissue	wild-type
2300	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19200160(flower-stage 12)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data