PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G01660.1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Lab Annot. methyltransferase
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G29590.1 11Arabidopsis thaliana6E-461784258132 (64)C
Os04g40530.1 7Oryza sativa1E-11324164780 (0)M
Os01g51530.1 7Oryza sativa3E-46188435624 (24)M
Zm00001eb079420_P001 agpv5Zea mays5E-11726363760 (0)C
v1_GRMZM2G100344_P01 4a53Zea mays5E-11726363766 (6)C
GRMZM2G100344_P01 3.21Zea mays5E-117263637615 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Bin3(2) CheR(1) DRE2_N(1) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_23(
TargetP: Mitochondria (Class 4 C0.334; M0.627; S0.006; _0.096)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 273 aa (-cTP 236)
Molecular Weight 31.76 kDA(-cTP )
PI 8.51(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
2289Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help