PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G01650.1 RING domain ligase1

Lab Annot.

RING domain ligase1
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G01650.2 11 Arabidopsis thaliana 0 489 100 100 0 (0) _
AT5G14420.1 11 Arabidopsis thaliana 0 397 80 89 0 (0) C
AT5G14420.2 11 Arabidopsis thaliana 0 397 80 89 0 (0) C
Os12g19030.1 7 Oryza sativa 0 385 69 80 0 (0) S
Os01g68060.1 7 Oryza sativa 0 391 68 80 0 (0) _
Os06g40650.2 7 Oryza sativa 0 410 63 74 0 (0) _
Zm00001eb144000_P001 agpv5 Zea mays 0 408 68 78 0 (0) _
GRMZM2G077809_P02 3.21 Zea mays 0 408 68 77 0 (0) _
v1_GRMZM2G077809_P02 4a53 Zea mays 0 408 68 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Copine(1) vWA-TerF-like(1) zf-C3HC4(2) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-RING_2(1)
TargetP:	Cytoplasm (Class 3 C0.269; M0.158; S0.040; _0.738)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	489 aa (-cTP 400)
Molecular Weight	53.31 kDA(-cTP )
PI	5.22(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data