PPDB

The Plant Proteome Database

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AT3G01610.1   cell division cycle 48C

Lab Annot. cell division cycle 48C
Mapman: 29.5.9 protein.degradation.AAA type
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G01610.2 11Arabidopsis thaliana08201001000 (0)M
AT5G03340.1 11Arabidopsis thaliana2E-1525934160207 (161)_
AT3G09840.1 11Arabidopsis thaliana2E-1485954260539 (352)_
Os06g01980.1 7Oryza sativa066256710 (0)M
Os03g05730.1 7Oryza sativa4E-152594426051 (51)_
Os10g30580.1 7Oryza sativa4E-151594416079 (79)_
Zm00001eb379150_P001 agpv5Zea mays065856700 (0)M
Zm00001eb327120_P002 agpv5Zea mays065955700 (0)M
Zm00001eb327120_P001 agpv5Zea mays065854690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(2) AAA_11(3) AAA_14(2) AAA_16(3) AAA_17(2) AAA_18(2) AAA_19(2) AAA_2(2) AAA_
TargetP: Mitochondria (Class 5 C0.039; M0.666; S0.020; _0.578)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 820 aa (-cTP 752)
Molecular Weight 90.00 kDA(-cTP )
PI 6.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1213Detail       leaf [A. thaliana] total leaf tissue P3-StrepII complemented
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help