PPDB

The Plant Proteome Database

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AT3G01370.1   CRM family member 2

Lab Annot. CFM2
Mapman: 27.1.1 RNA.processing.splicing
Curated Location plastid stroma (Pubmed: 23198870 18065687 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G14510.1 11Arabidopsis thaliana2E-15563643606 (6)C
AT3G23070.1 11Arabidopsis thaliana7E-150776405422 (21)C
AT3G18390.1 11Arabidopsis thaliana2E-148595426329 (27)C
Os04g39060.1 7Oryza sativa073147610 (0)C
Os04g39060.2 7Oryza sativa073147616 (6)C
Os05g47850.1 7Oryza sativa6E-156650416117 (17)C
GRMZM2G094072_P01 3.21Zea mays0758486445 (45)C
v1_GRMZM2G094072_P01 4a53Zea mays0758486440 (40)C
Zm00001eb424430_P001 agpv5Zea mays075848640 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CRS1_YhbY(4) MarR_2(1)
TargetP: Chloroplast (Class 2 C0.720; M0.095; S0.014; _0.073)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1011 aa (-cTP 966)
Molecular Weight 113.66 kDA(-cTP 108.52)
PI 8.84(-cTP 8.56)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1640Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help