PPDB

PPDB	The Plant Proteome Database

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AT3G01270.1 Pectate lyase family protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G15110.1 11 Arabidopsis thaliana 0 477 79 88 0 (0) S
AT1G14420.1 11 Arabidopsis thaliana 5E-177 466 53 69 1 (1) S
AT2G02720.1 11 Arabidopsis thaliana 9E-176 472 52 68 0 (0) S
Os02g12300.1 7 Oryza sativa 6E-165 470 51 63 0 (0) S
Os06g38510.2 7 Oryza sativa 1E-161 467 51 65 0 (0) S
Os06g38510.1 7 Oryza sativa 1E-161 467 51 65 0 (0) S
GRMZM2G364349_P01 3.21 Zea mays 4E-162 446 51 65 0 (0) S
Zm00001eb270510_P001 agpv5 Zea mays 4E-162 446 51 65 0 (0) S
v1_GRMZM2G364349_P01 4a53 Zea mays 4E-162 446 51 65 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Pec_lyase_N(1) Pectate_lyase_4(1) Toxin_13(2)
TargetP:	Secreted (Class 1 C0.008; M0.038; S0.966; _0.124)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	475 aa (-cTP 452)
Molecular Weight	53.85 kDA(-cTP )
PI	9.17(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data