PPDB

 The Plant Proteome Database

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AT3G01175.1   transmembrane protein
Lab Annot.
Mapman: 29.2.1.2.2.34 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39785.1 11Arabidopsis thaliana8E-2634228480 (0)_
AT5G39785.3 11Arabidopsis thaliana8E-2634228480 (0)_
AT5G39785.5 11Arabidopsis thaliana8E-2634228480 (0)_
Os09g24700.1 7Oryza sativa4E-3134931490 (0)_
Os08g40820.2 7Oryza sativa5E-1834230430 (0)_
Os08g40820.1 7Oryza sativa5E-1834230430 (0)_
GRMZM2G077340_P02 3.21Zea mays6E-3234532490 (0)_
v1_GRMZM2G126204_P01 4a53Zea mays6E-3234532490 (0)_
GRMZM2G126204_P01 3.21Zea mays6E-3234532490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ada3(1) DUF1666(1)
TargetP: Cytoplasm (Class 4 C0.011; M0.049; S0.256; _0.615)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 577 aa (-cTP 490)
Molecular Weight 67.91 kDA(-cTP )
PI 5.18(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help