PPDB

PPDB	The Plant Proteome Database

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AT3G01150.1 polypyrimidine tract-binding protein 1

Lab Annot.

Mapman: 27.1 RNA.processing

Curated Location

TAIR curated location: nucleus & cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G01150.3 11 Arabidopsis thaliana 0 313 100 100 0 (0) _
AT3G01150.2 11 Arabidopsis thaliana 0 274 98 98 0 (0) S
AT5G53180.1 11 Arabidopsis thaliana 0 337 74 86 3 (0) _
Os03g25980.2 7 Oryza sativa 0 359 78 88 0 (0) M
Os03g25980.1 7 Oryza sativa 0 359 78 88 0 (0) M
Os08g33830.1 7 Oryza sativa 0 374 73 82 0 (0) _
Zm00001eb041470_P004 agpv5 Zea mays 0 366 74 84 0 (0) _
Zm00001eb041470_P005 agpv5 Zea mays 0 370 73 84 0 (0) _
v1_GRMZM2G178169_P02 4a53 Zea mays 0 396 69 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4523(3) RRM_1(3) RRM_3(2) RRM_5(3) RRM_8(2) RRM_occluded(3)
TargetP:	Cytoplasm (Class 4 C0.059; M0.287; S0.034; _0.620)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	399 aa (-cTP 397)
Molecular Weight	43.59 kDA(-cTP )
PI	6.41(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data