PPDB

PPDB	The Plant Proteome Database

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AT3G01100.1 hypothetical protein 1

Lab Annot.

protein with unknown function
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G01100.4 11 Arabidopsis thaliana 0 703 100 100 0 (0) _
AT3G01100.3 11 Arabidopsis thaliana 0 588 100 100 0 (0) _
AT3G01100.2 11 Arabidopsis thaliana 0 584 99 100 0 (0) S
Os12g39320.1 7 Oryza sativa 0 707 53 71 0 (0) M
Os12g43720.1 7 Oryza sativa 0 710 45 65 0 (0) S
Os03g51620.1 7 Oryza sativa 0 704 44 64 0 (0) S
Zm00001eb030220_P001 agpv5 Zea mays 0 706 51 70 0 (0) S
GRMZM2G039186_P01 3.21 Zea mays 0 706 51 70 0 (0) S
v1_GRMZM2G039186_P01 4a53 Zea mays 0 706 51 70 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PHM7_cyt(1) RSN1_7TM(2) RSN1_TM(4)
TargetP:	Secreted (Class 2 C0.007; M0.187; S0.893; _0.048)
Predotar:
Subcel. Location:
TM-HMM prediction:	9 TMs
Aramemnon:	9 TMs
TAT position:
Length	703 aa (-cTP 663)
Molecular Weight	79.73 kDA(-cTP )
PI	8.81(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data