PPDB

PPDB	The Plant Proteome Database

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AT2G48100.1 Exonuclease family protein

Lab Annot.

Mapman: 28.99 DNA.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G48100.7 11 Arabidopsis thaliana 0 344 100 100 0 (0) _
AT2G48100.8 11 Arabidopsis thaliana 0 344 100 100 0 (0) _
AT2G48100.6 11 Arabidopsis thaliana 0 344 100 100 0 (0) _
Os02g47920.1 7 Oryza sativa 3E-112 352 48 66 0 (0) _
Os01g01770.1 7 Oryza sativa 1E-86 352 43 57 0 (0) _
Os08g28980.1 7 Oryza sativa 3E-20 165 34 52 0 (0) C
Zm00001eb252310_P001 agpv5 Zea mays 4E-111 350 48 66 0 (0) _
v1_GRMZM2G127846_P01 4a53 Zea mays 4E-111 350 48 66 0 (0) _
GRMZM2G127846_P01 3.21 Zea mays 4E-111 350 48 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DNA_pol_A_exo1(2) RNase_T(1) zf-C2H2(3) zf-C2H2_2(3) zf-C2H2_4(3) zf-C2H2_8(2) z
TargetP:	Cytoplasm (Class 5 C0.109; M0.476; S0.015; _0.512)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	344 aa (-cTP 310)
Molecular Weight	39.12 kDA(-cTP )
PI	8.69(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2113	Detail								leaf [A. thaliana]	Stroma stroma	wt

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data