PPDB

The Plant Proteome Database

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AT2G47960.1   trafficking protein particle complex subunit-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g35570.1 7Oryza sativa044661750 (0)C
GRMZM5G861997_P01 3.21Zea mays044962767 (3)C
Zm00001eb044550_P001 agpv5Zea mays044962760 (0)C
Zm00001eb044550_P002 agpv5Zea mays9E-18044960740 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF974(1) Transglut_C(3)
TargetP: Mitochondria (Class 5 C0.256; M0.418; S0.044; _0.213)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 442 aa (-cTP 402)
Molecular Weight 49.29 kDA(-cTP )
PI 5.86(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21826108(SYP trans-Golgi-filtered)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help