PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G47900.3   tubby like protein 3
Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G47900.1 11Arabidopsis thaliana040799990 (0)_
AT2G47900.2 11Arabidopsis thaliana040799990 (0)_
AT3G06380.1 11Arabidopsis thaliana7E-15540856700 (0)M
Os03g22800.1 7Oryza sativa040769800 (0)M
Os07g47110.1 7Oryza sativa041462780 (0)C
Os05g36190.1 7Oryza sativa1E-16744654690 (0)M
GRMZM2G378907_P01 3.21Zea mays040769800 (0)C
v1_GRMZM2G378907_P02 4a53Zea mays044763730 (0)C
v1_GRMZM2G378907_P03 4a53Zea mays044763730 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3527(1) F-box(2) F-box-like(1) Tub(1)
TargetP: Cytoplasm (Class 3 C0.118; M0.222; S0.021; _0.712)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 407 aa (-cTP 382)
Molecular Weight 45.38 kDA(-cTP )
PI 9.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help