PPDB

The Plant Proteome Database

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AT2G47790.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43770.1 11Arabidopsis thaliana1E-0715228464 (2)C
AT4G02730.1 11Arabidopsis thaliana5E-0713429520 (0)_
AT2G41500.2 11Arabidopsis thaliana3E-0613330480 (0)C
Os12g19590.1 7Oryza sativa1E-15536861770 (0)_
Os12g19590.3 7Oryza sativa8E-14435459760 (0)_
Os12g19590.2 7Oryza sativa8E-7719064820 (0)_
Zm00001eb157470_P004 agpv5Zea mays2E-15736961770 (0)C
v1_GRMZM2G150631_P02 4a53Zea mays2E-15736961770 (0)C
GRMZM2G150631_P02 3.21Zea mays2E-15736961770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(3) WD40(4)
TargetP: Cytoplasm (Class 1 C0.078; M0.104; S0.072; _0.905)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 392 aa (-cTP 333)
Molecular Weight 43.07 kDA(-cTP )
PI 4.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help