PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G47750.1   putative indole-3-acetic acid-amido synthetase GH3.9

Lab Annot. auxin-responsive protein -related
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G28130.1 11Arabidopsis thaliana059855721 (1)_
AT4G27260.1 11Arabidopsis thaliana058654731 (1)_
AT5G54510.1 11Arabidopsis thaliana058654733 (3)_
Os07g47490.2 7Oryza sativa059162750 (0)_
Os07g47490.1 7Oryza sativa059162750 (0)_
Os07g47490.3 7Oryza sativa057262760 (0)_
v1_GRMZM2G414460_P02 4a53Zea mays054561750 (0)_
v1_GRMZM2G414460_P01 4a53Zea mays054561750 (0)_
GRMZM2G414460_P02 3.21Zea mays054561750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GH3(1)
TargetP: Cytoplasm (Class 2 C0.060; M0.086; S0.173; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 585 aa (-cTP 564)
Molecular Weight 66.16 kDA(-cTP )
PI 6.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help