PPDB

PPDB	The Plant Proteome Database

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AT2G47700.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G47700.2 11 Arabidopsis thaliana 0 247 100 100 0 (0) _
AT3G05545.1 11 Arabidopsis thaliana 1E-44 118 63 77 0 (0) _
AT4G13490.1 11 Arabidopsis thaliana 5E-18 84 42 64 0 (0) _
Os05g06270.1 7 Oryza sativa 2E-44 125 60 73 0 (0) _
Os01g24880.2 7 Oryza sativa 7E-38 189 43 55 0 (0) _
Os01g24880.1 7 Oryza sativa 7E-38 369 32 45 0 (0) _
Zm00001eb346030_P001 agpv5 Zea mays 2E-53 364 38 50 0 (0) _
Zm00001eb346030_P002 agpv5 Zea mays 1E-52 364 38 50 0 (0) _
GRMZM2G153250_P01 3.21 Zea mays 6E-49 370 37 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4
TargetP:	Cytoplasm (Class 1 C0.113; M0.077; S0.094; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	358 aa (-cTP 275)
Molecular Weight	39.94 kDA(-cTP )
PI	5.96(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data