PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G47650.1 UDP-xylose synthase 4

Lab Annot.

UXS4 (UDP-XYLOSE SYNTHASE 4); catalytic
Mapman: 10.1.5 cell wall.precursor synthesis.UXS

Curated Location

TAIR curated location: membrane12481102

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53520.2 11 Arabidopsis thaliana 0 441 66 78 1 (1) _
AT3G53520.1 11 Arabidopsis thaliana 0 441 67 79 1 (1) _
AT3G62830.2 11 Arabidopsis thaliana 0 434 90 94 13 (9) _
Os03g17230.1 7 Oryza sativa 0 321 81 93 0 (0) M
Os01g21320.1 7 Oryza sativa 0 435 74 82 8 (8) _
Os05g29990.1 7 Oryza sativa 0 452 73 80 14 (14) _
Zm00001eb148640_P001 agpv5 Zea mays 0 393 73 83 0 (0) C
Zm00001eb130620_P003 agpv5 Zea mays 0 449 72 79 0 (0) _
GRMZM2G381473_P02 3.21 Zea mays 0 441 73 80 23 (18) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(1) adh_short(1) Epimerase(1) GDP_Man_Dehyd(1) KR(1) NAD_binding_4(2) P
TargetP:	Cytoplasm (Class 1 C0.040; M0.119; S0.031; _0.957)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	443 aa (-cTP 353)
Molecular Weight	49.95 kDA(-cTP )
PI	8.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2274	Detail								seedlings [A. thaliana]	total tissue	wild-type
2275	Detail								seedlings [A. thaliana]	total tissue	wild-type
2290	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

14760709(Vacuolar proteome)
16247729(mature Pollen)
16618929(Golgi)
17407188(cotyledon)
17151019(vacuole - suspension cell)
17432890(leaf total membranes)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
22430844(Golgi-cell-culture)

Comparative Proteomics Data