PPDB

PPDB	The Plant Proteome Database

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AT2G47620.1 SWITCH/sucrose nonfermenting 3A

Lab Annot.

Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G47620.2 11 Arabidopsis thaliana 0 389 100 100 0 (0) _
AT1G21700.1 11 Arabidopsis thaliana 6E-47 513 26 49 12 (11) _
AT2G33610.1 11 Arabidopsis thaliana 2E-43 493 25 47 0 (0) C
Os04g40420.1 7 Oryza sativa 9E-115 532 39 57 0 (0) _
Os02g10060.1 7 Oryza sativa 3E-54 489 29 48 0 (0) C
Os11g08080.1 7 Oryza sativa 8E-39 519 26 47 0 (0) M
Zm00001eb079510_P003 agpv5 Zea mays 1E-98 536 40 57 0 (0) _
v1_GRMZM2G135410_P01 4a53 Zea mays 1E-98 536 40 57 12 (12) _
GRMZM2G135410_P01 3.21 Zea mays 1E-98 536 40 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF241(1) DUF4611(2) MSL1_dimer(1) Myb_DNA-bind_6(1) Myb_DNA-binding(2) SWIRM(1)
TargetP:	Cytoplasm (Class 2 C0.178; M0.105; S0.138; _0.881)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	512 aa (-cTP 436)
Molecular Weight	57.48 kDA(-cTP )
PI	4.81(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data