PPDB

PPDB	The Plant Proteome Database

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AT2G47550.1 Plant invertase/pectin methylesterase inhibitor superfamily

Lab Annot.

pectin methylesterase (CE8)
Mapman: 10.8.1 cell wall.pectin*esterases.PME

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G02330.1 11 Arabidopsis thaliana 0 570 63 78 0 (0) S
AT1G02810.1 11 Arabidopsis thaliana 0 586 62 75 0 (0) S
AT3G10720.2 11 Arabidopsis thaliana 2E-162 541 44 61 0 (0) S
Os01g20980.1 7 Oryza sativa 0 536 56 70 0 (0) S
Os05g29790.1 7 Oryza sativa 0 541 53 69 0 (0) S
Os07g47830.1 7 Oryza sativa 1E-137 471 47 61 0 (0) S
Zm00001eb130480_P001 agpv5 Zea mays 0 535 54 71 0 (0) S
GRMZM2G128682_P01 3.21 Zea mays 0 541 53 70 0 (0) S
v1_GRMZM2G128682_P01 4a53 Zea mays 0 541 53 70 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Pectate_lyase_3(1) Pectinesterase(1) PMEI(1)
TargetP:	Secreted (Class 3 C0.256; M0.008; S0.787; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	560 aa (-cTP 511)
Molecular Weight	61.50 kDA(-cTP )
PI	9.02(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data