PPDB

PPDB	The Plant Proteome Database

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AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH24)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20920.2 11 Arabidopsis thaliana 3E-145 603 44 61 0 (0) _
AT1G20920.6 11 Arabidopsis thaliana 6E-142 608 43 61 0 (0) _
AT1G20920.4 11 Arabidopsis thaliana 6E-142 608 43 61 0 (0) _
Os03g19530.1 7 Oryza sativa 0 786 68 80 5 (5) M
Os08g06344.2 7 Oryza sativa 9E-144 589 44 61 1 (1) _
Os08g06344.3 7 Oryza sativa 9E-144 589 44 61 1 (1) _
GRMZM2G121871_P01 3.21 Zea mays 0 781 67 79 0 (0) M
Zm00001eb396040_P001 agpv5 Zea mays 0 579 71 82 0 (0) _
GRMZM2G090869_P01 3.21 Zea mays 0 782 68 79 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) Helicase_C(2) ResIII(1) SNF2_N(1) Toprim(2)
TargetP:	Mitochondria (Class 4 C0.162; M0.624; S0.037; _0.246)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	760 aa (-cTP 726)
Molecular Weight	83.05 kDA(-cTP )
PI	5.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data