PPDB

The Plant Proteome Database

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AT2G47280.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G19150.1 11Arabidopsis thaliana5E-14233060740 (0)S
AT2G19150.2 11Arabidopsis thaliana3E-11627761740 (0)S
AT5G18990.1 11Arabidopsis thaliana2E-9230846610 (0)S
Os01g19440.1 7Oryza sativa1E-8332643570 (0)S
Os07g46190.1 7Oryza sativa6E-6627041570 (0)M
Os07g41650.1 7Oryza sativa4E-6430540530 (0)S
GRMZM2G121278_P01 3.21Zea mays8E-8331047590 (0)M
v1_GRMZM2G121278_P01 4a53Zea mays8E-8331047590 (0)M
Zm00001eb340380_P001 agpv5Zea mays4E-6734040520 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectinesterase(1)
TargetP: Secreted (Class 1 C0.001; M0.166; S0.982; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 336 aa (-cTP 288)
Molecular Weight 37.02 kDA(-cTP )
PI 5.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help