PPDB

The Plant Proteome Database

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AT2G47130.1   NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot. short-chain dehydrogenase/reductase (SDR) protein
Mapman: 26.22 misc.short chain dehydrogenase/reductase (SDR)
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G29260.1 11Arabidopsis thaliana8E-16025585910 (0)_
AT3G29250.2 11Arabidopsis thaliana4E-15425682910 (0)_
AT3G29250.3 11Arabidopsis thaliana2E-15325682910 (0)_
Os03g61740.1 7Oryza sativa4E-8426055696 (6)_
Os07g46930.1 7Oryza sativa9E-7026445630 (0)M
Os07g46920.1 7Oryza sativa1E-6726445630 (0)M
Zm00001eb063410_P001 agpv5Zea mays9E-8825755700 (0)_
GRMZM2G156739_P01 3.21Zea mays9E-8825755700 (0)_
v1_GRMZM2G156739_P01 4a53Zea mays9E-8825755700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 3Beta_HSD(1) adh_short(1) adh_short_C2(1) Epimerase(1) GDP_Man_Dehyd(1) KR(2) Po
TargetP: Cytoplasm (Class 3 C0.046; M0.202; S0.306; _0.718)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 257 aa (-cTP 236)
Molecular Weight 26.90 kDA(-cTP )
PI 6.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help